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Year Number of Results
1988 2
1995 1
1996 1
1998 2
1999 1
2000 1
2001 2
2003 2
2004 2
2005 2
2006 3
2007 2
2009 2
2013 1
2014 2
2015 2
2016 1
2017 1
2018 6
2019 6
2020 7
2021 16
2022 13
2023 14
2024 14
2025 11

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101 results

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Page 1
Coffee consumption is associated with intestinal Lawsonibacter asaccharolyticus abundance and prevalence across multiple cohorts.
Manghi P, Bhosle A, Wang K, Marconi R, Selma-Royo M, Ricci L, Asnicar F, Golzato D, Ma W, Hang D, Thompson KN, Franzosa EA, Nabinejad A, Tamburini S, Rimm EB, Garrett WS, Sun Q, Chan AT, Valles-Colomer M, Arumugam M, Bermingham KM, Giordano F, Davies R, Hadjigeorgiou G, Wolf J, Strowig T, Berry SE, Huttenhower C, Spector TD, Segata N, Song M. Manghi P, et al. Among authors: thompson kn. Nat Microbiol. 2024 Dec;9(12):3120-3134. doi: 10.1038/s41564-024-01858-9. Epub 2024 Nov 18. Nat Microbiol. 2024. PMID: 39558133 Free PMC article.
Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4.
Blanco-Míguez A, Beghini F, Cumbo F, McIver LJ, Thompson KN, Zolfo M, Manghi P, Dubois L, Huang KD, Thomas AM, Nickols WA, Piccinno G, Piperni E, Punčochář M, Valles-Colomer M, Tett A, Giordano F, Davies R, Wolf J, Berry SE, Spector TD, Franzosa EA, Pasolli E, Asnicar F, Huttenhower C, Segata N. Blanco-Míguez A, et al. Among authors: thompson kn. Nat Biotechnol. 2023 Nov;41(11):1633-1644. doi: 10.1038/s41587-023-01688-w. Epub 2023 Feb 23. Nat Biotechnol. 2023. PMID: 36823356 Free PMC article.
Carrageenan and insulin resistance in humans: a randomised double-blind cross-over trial.
Wagner R, Buettner J, Heni M, Fritsche L, Kullmann S, Wagmüller M, Peter A, Preissl H, Machann J, Jumpertz von Schwartzenberg R, Birkenfeld AL, Pape UF, van Hall G, Plomgaard P, Häring HU, Fritsche A, Thompson KN, Klein R, Stefan N. Wagner R, et al. Among authors: thompson kn. BMC Med. 2024 Nov 26;22(1):558. doi: 10.1186/s12916-024-03771-8. BMC Med. 2024. PMID: 39593091 Free PMC article. Clinical Trial.
Multi-omic analysis reveals transkingdom gut dysbiosis in metabolic dysfunction-associated steatotic liver disease.
Kim H, Nelson P, Nzabarushimana E, Shen J, Jensen J, Bhosle A, Li C, Lee N, Everett C, Berdy B, Frongillo G, Livny J, Hu FB, Simon TG, McIver L, Franzosa EA, Chan AT, Hayete B, Thompson KN, Huttenhower C, Nguyen LH. Kim H, et al. Among authors: thompson kn. Nat Metab. 2025 Jul;7(7):1476-1492. doi: 10.1038/s42255-025-01318-6. Epub 2025 Jul 2. Nat Metab. 2025. PMID: 40604156 Free PMC article.
Pooled analysis of 3,741 stool metagenomes from 18 cohorts for cross-stage and strain-level reproducible microbial biomarkers of colorectal cancer.
Piccinno G, Thompson KN, Manghi P, Ghazi AR, Thomas AM, Blanco-Míguez A, Asnicar F, Mladenovic K, Pinto F, Armanini F, Punčochář M, Piperni E, Heidrich V, Fackelmann G, Ferrero G, Tarallo S, Nguyen LH, Yan Y, Keles NA, Tuna BG, Vymetalkova V, Trompetto M, Liska V, Hucl T, Vodicka P, Bencsiková B, Čarnogurská M, Popovici V, Marmorino F, Cremolini C, Pardini B, Cordero F, Song M, Chan AT, Derosa L, Zitvogel L, Huttenhower C, Naccarati A, Budinska E, Segata N. Piccinno G, et al. Among authors: thompson kn. Nat Med. 2025 Jul;31(7):2416-2429. doi: 10.1038/s41591-025-03693-9. Epub 2025 Jun 3. Nat Med. 2025. PMID: 40461820 Free PMC article.
Alterations in the gut microbiome implicate key taxa and metabolic pathways across inflammatory arthritis phenotypes.
Thompson KN, Bonham KS, Ilott NE, Britton GJ, Colmenero P, Bullers SJ, McIver LJ, Ma S, Nguyen LH, Filer A, Brough I, Pearson C, Moussa C, Kumar V, Lam LH, Jackson MA, Pawluk A; Inflammatory Arthritis Microbiome Consortium (IAMC) investigators group; Kiriakidis S, Taylor PC, Wedderburn LR, Marsden B, Young SP, Littman DR, Faith JJ, Pratt AG, Bowness P, Raza K, Powrie F, Huttenhower C; IAMC. Thompson KN, et al. Sci Transl Med. 2023 Jul 26;15(706):eabn4722. doi: 10.1126/scitranslmed.abn4722. Epub 2023 Jul 26. Sci Transl Med. 2023. PMID: 37494472
Discovery of bioactive microbial gene products in inflammatory bowel disease.
Zhang Y, Bhosle A, Bae S, McIver LJ, Pishchany G, Accorsi EK, Thompson KN, Arze C, Wang Y, Subramanian A, Kearney SM, Pawluk A, Plichta DR, Rahnavard A, Shafquat A, Xavier RJ, Vlamakis H, Garrett WS, Krueger A, Huttenhower C, Franzosa EA. Zhang Y, et al. Among authors: thompson kn. Nature. 2022 Jun;606(7915):754-760. doi: 10.1038/s41586-022-04648-7. Epub 2022 May 25. Nature. 2022. PMID: 35614211 Free PMC article.
Early intervention for personality disorder.
Chanen AM, Thompson KN. Chanen AM, et al. Among authors: thompson kn. Curr Opin Psychol. 2018 Jun;21:132-135. doi: 10.1016/j.copsyc.2018.02.012. Epub 2018 Feb 28. Curr Opin Psychol. 2018. PMID: 29533848 Review.
101 results