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Table representation of search results timeline featuring number of search results per year.

Year Number of Results
1995 1
1997 1
1998 1
1999 2
2000 1
2001 3
2002 3
2003 1
2004 3
2005 2
2006 3
2008 2
2009 2
2010 4
2011 8
2012 8
2013 2
2014 11
2015 13
2016 8
2017 4
2018 10
2019 7
2020 6
2021 12
2022 8
2023 11
2024 2
2025 4

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137 results

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Page 1
Towards complete and error-free genome assemblies of all vertebrate species.
Rhie A, McCarthy SA, Fedrigo O, Damas J, Formenti G, Koren S, Uliano-Silva M, Chow W, Fungtammasan A, Kim J, Lee C, Ko BJ, Chaisson M, Gedman GL, Cantin LJ, Thibaud-Nissen F, Haggerty L, Bista I, Smith M, Haase B, Mountcastle J, Winkler S, Paez S, Howard J, Vernes SC, Lama TM, Grutzner F, Warren WC, Balakrishnan CN, Burt D, George JM, Biegler MT, Iorns D, Digby A, Eason D, Robertson B, Edwards T, Wilkinson M, Turner G, Meyer A, Kautt AF, Franchini P, Detrich HW 3rd, Svardal H, Wagner M, Naylor GJP, Pippel M, Malinsky M, Mooney M, Simbirsky M, Hannigan BT, Pesout T, Houck M, Misuraca A, Kingan SB, Hall R, Kronenberg Z, Sović I, Dunn C, Ning Z, Hastie A, Lee J, Selvaraj S, Green RE, Putnam NH, Gut I, Ghurye J, Garrison E, Sims Y, Collins J, Pelan S, Torrance J, Tracey A, Wood J, Dagnew RE, Guan D, London SE, Clayton DF, Mello CV, Friedrich SR, Lovell PV, Osipova E, Al-Ajli FO, Secomandi S, Kim H, Theofanopoulou C, Hiller M, Zhou Y, Harris RS, Makova KD, Medvedev P, Hoffman J, Masterson P, Clark K, Martin F, Howe K, Flicek P, Walenz BP, Kwak W, Clawson H, Diekhans M, Nassar L, Paten B, Kraus RHS, Crawford AJ, Gilbert MTP, Zhang G, Venkatesh B, Murphy RW, Koepfli KP, Shapiro B, Johnso… See abstract for full author list ➔ Rhie A, et al. Among authors: warnow t. Nature. 2021 Apr;592(7856):737-746. doi: 10.1038/s41586-021-03451-0. Epub 2021 Apr 28. Nature. 2021. PMID: 33911273 Free PMC article.
PASTA for proteins.
Collins K, Warnow T. Collins K, et al. Among authors: warnow t. Bioinformatics. 2018 Nov 15;34(22):3939-3941. doi: 10.1093/bioinformatics/bty495. Bioinformatics. 2018. PMID: 29931282 Free PMC article.
Why sequence all eukaryotes?
Blaxter M, Archibald JM, Childers AK, Coddington JA, Crandall KA, Di Palma F, Durbin R, Edwards SV, Graves JAM, Hackett KJ, Hall N, Jarvis ED, Johnson RN, Karlsson EK, Kress WJ, Kuraku S, Lawniczak MKN, Lindblad-Toh K, Lopez JV, Moran NA, Robinson GE, Ryder OA, Shapiro B, Soltis PS, Warnow T, Zhang G, Lewin HA. Blaxter M, et al. Among authors: warnow t. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2115636118. doi: 10.1073/pnas.2115636118. Proc Natl Acad Sci U S A. 2022. PMID: 35042801 Free PMC article.
Phylogenomic branch length estimation using quartets.
Tabatabaee Y, Zhang C, Warnow T, Mirarab S. Tabatabaee Y, et al. Among authors: warnow t. Bioinformatics. 2023 Jun 30;39(39 Suppl 1):i185-i193. doi: 10.1093/bioinformatics/btad221. Bioinformatics. 2023. PMID: 37387151 Free PMC article.
Biological databases in the age of generative artificial intelligence.
Pop M, Attwood TK, Blake JA, Bourne PE, Conesa A, Gaasterland T, Hunter L, Kingsford C, Kohlbacher O, Lengauer T, Markel S, Moreau Y, Noble WS, Orengo C, Ouellette BFF, Parida L, Przulj N, Przytycka TM, Ranganathan S, Schwartz R, Valencia A, Warnow T. Pop M, et al. Among authors: warnow t. Bioinform Adv. 2025 Mar 20;5(1):vbaf044. doi: 10.1093/bioadv/vbaf044. eCollection 2025. Bioinform Adv. 2025. PMID: 40177265 Free PMC article.
Complexity of avian evolution revealed by family-level genomes.
Stiller J, Feng S, Chowdhury AA, Rivas-González I, Duchêne DA, Fang Q, Deng Y, Kozlov A, Stamatakis A, Claramunt S, Nguyen JMT, Ho SYW, Faircloth BC, Haag J, Houde P, Cracraft J, Balaban M, Mai U, Chen G, Gao R, Zhou C, Xie Y, Huang Z, Cao Z, Yan Z, Ogilvie HA, Nakhleh L, Lindow B, Morel B, Fjeldså J, Hosner PA, da Fonseca RR, Petersen B, Tobias JA, Székely T, Kennedy JD, Reeve AH, Liker A, Stervander M, Antunes A, Tietze DT, Bertelsen MF, Lei F, Rahbek C, Graves GR, Schierup MH, Warnow T, Braun EL, Gilbert MTP, Jarvis ED, Mirarab S, Zhang G. Stiller J, et al. Among authors: warnow t. Nature. 2024 May;629(8013):851-860. doi: 10.1038/s41586-024-07323-1. Epub 2024 Apr 1. Nature. 2024. PMID: 38560995 Free PMC article.
137 results