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80 results

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Page 1
Gut-microbiota-targeted diets modulate human immune status.
Wastyk HC, Fragiadakis GK, Perelman D, Dahan D, Merrill BD, Yu FB, Topf M, Gonzalez CG, Van Treuren W, Han S, Robinson JL, Elias JE, Sonnenburg ED, Gardner CD, Sonnenburg JL. Wastyk HC, et al. Among authors: yu fb. Cell. 2021 Aug 5;184(16):4137-4153.e14. doi: 10.1016/j.cell.2021.06.019. Epub 2021 Jul 12. Cell. 2021. PMID: 34256014 Free PMC article. Clinical Trial.
Single-cell transcriptional diversity is a hallmark of developmental potential.
Gulati GS, Sikandar SS, Wesche DJ, Manjunath A, Bharadwaj A, Berger MJ, Ilagan F, Kuo AH, Hsieh RW, Cai S, Zabala M, Scheeren FA, Lobo NA, Qian D, Yu FB, Dirbas FM, Clarke MF, Newman AM. Gulati GS, et al. Among authors: yu fb. Science. 2020 Jan 24;367(6476):405-411. doi: 10.1126/science.aax0249. Science. 2020. PMID: 31974247 Free PMC article.
Design, construction, and in vivo augmentation of a complex gut microbiome.
Cheng AG, Ho PY, Aranda-Díaz A, Jain S, Yu FB, Meng X, Wang M, Iakiviak M, Nagashima K, Zhao A, Murugkar P, Patil A, Atabakhsh K, Weakley A, Yan J, Brumbaugh AR, Higginbottom S, Dimas A, Shiver AL, Deutschbauer A, Neff N, Sonnenburg JL, Huang KC, Fischbach MA. Cheng AG, et al. Among authors: yu fb. Cell. 2022 Sep 15;185(19):3617-3636.e19. doi: 10.1016/j.cell.2022.08.003. Epub 2022 Sep 6. Cell. 2022. PMID: 36070752 Free PMC article.
Ultra-deep sequencing of Hadza hunter-gatherers recovers vanishing gut microbes.
Carter MM, Olm MR, Merrill BD, Dahan D, Tripathi S, Spencer SP, Yu FB, Jain S, Neff N, Jha AR, Sonnenburg ED, Sonnenburg JL. Carter MM, et al. Among authors: yu fb. Cell. 2023 Jul 6;186(14):3111-3124.e13. doi: 10.1016/j.cell.2023.05.046. Epub 2023 Jun 21. Cell. 2023. PMID: 37348505 Free PMC article.
ENPP1 is an innate immune checkpoint of the anticancer cGAMP-STING pathway in breast cancer.
Wang S, Böhnert V, Joseph AJ, Sudaryo V, Skariah G, Swinderman JT, Yu FB, Subramanyam V, Wolf DM, Lyu X, Gilbert LA, Van't Veer LJ, Goodarzi H, Li L. Wang S, et al. Among authors: yu fb. Proc Natl Acad Sci U S A. 2023 Dec 26;120(52):e2313693120. doi: 10.1073/pnas.2313693120. Epub 2023 Dec 20. Proc Natl Acad Sci U S A. 2023. PMID: 38117852 Free PMC article.
Establishment and characterization of stable, diverse, fecal-derived in vitro microbial communities that model the intestinal microbiota.
Aranda-Díaz A, Ng KM, Thomsen T, Real-Ramírez I, Dahan D, Dittmar S, Gonzalez CG, Chavez T, Vasquez KS, Nguyen TH, Yu FB, Higginbottom SK, Neff NF, Elias JE, Sonnenburg JL, Huang KC. Aranda-Díaz A, et al. Among authors: yu fb. Cell Host Microbe. 2022 Feb 9;30(2):260-272.e5. doi: 10.1016/j.chom.2021.12.008. Epub 2022 Jan 19. Cell Host Microbe. 2022. PMID: 35051349 Free PMC article.
Virtual Cell Challenge: Toward a Turing test for the virtual cell.
Roohani YH, Hua TJ, Tung PY, Bounds LR, Yu FB, Dobin A, Teyssier N, Adduri A, Woodrow A, Plosky BS, Mehta R, Hsu B, Sullivan J, Ricci-Tam C, Li N, Kazaks J, Gilbert LA, Konermann S, Hsu PD, Goodarzi H, Burke DP. Roohani YH, et al. Among authors: yu fb. Cell. 2025 Jun 26;188(13):3370-3374. doi: 10.1016/j.cell.2025.06.008. Cell. 2025. PMID: 40578317
Coordinated variation in the immune systems and microbiomes of healthy humans is linked to tonic interferon states.
Babdor J, Patel RK, Davidson B, Noecker C, Rahim M, Bisanz JE, Tenvooren I, Marquez D, Calvo M, Johri V, McCarthy E, Shaheed A, Ekstrand C, Weakley AM, Yu FB, Fiehn O, Turnbaugh PJ, Combes AJ, Fragiadakis GK, Spitzer MH. Babdor J, et al. Among authors: yu fb. bioRxiv [Preprint]. 2024 Dec 3:2024.11.27.625750. doi: 10.1101/2024.11.27.625750. bioRxiv. 2024. PMID: 39677657 Free PMC article. Preprint.
80 results